Σάββατο, 23 Μαρτίου 2019

Proteomics


Revisiting <em>Polybia paulista</em> wasp venom using shotgun proteomics – Insights into the N-linked glycosylated venom proteins
Publication date: Available online 21 March 2019Source: Journal of ProteomicsAuthor(s): Caroline Lacerra de Souza, José Roberto Aparecido dos Santos-Pinto, Franciele Grego Esteves, Amilcar Perez-Riverol, Luís Gustavo Romani Fernandes, Ricardo de Lima Zollner, Mario Sergio PalmaAbstractThe partial proteome of Polybia paulista wasp venom was previously reported elsewhere using a gel-dependent approach and resulted in the identification of a limited number of venom toxins. Here, we reinvestigated the...
ScienceDirect Publication: Journal of Proteomics
Fri Mar 22, 2019 17:06
Label-free proteomic analysis of silkworm midgut infected by <em>Bombyx mori</em> nuclear polyhedrosis virus
Publication date: Available online 20 March 2019Source: Journal of ProteomicsAuthor(s): Yuan Zhang, Dingguo Xia, Qiaoling Zhao, Guozheng Zhang, Yeshun Zhang, Zhiyong Qiu, Dongxu Shen, Cheng LuAbstractBombyx mori nuclear polyhedrosis virus (BmNPV) is the most damaging virus for the production of silkworm cocoons. Antivirus research continues to be an important aspect of the silkworm industry. Two-dimensional electrophoresis and mass spectrometry have been applied for analyzing the midgut proteome...
ScienceDirect Publication: Journal of Proteomics
Thu Mar 21, 2019 16:02
Beef tenderness and intramuscular fat proteomic biomarkers: Effect of gender and rearing practices
Publication date: 30 May 2019Source: Journal of Proteomics, Volume 200Author(s): Brigitte Picard, Mohammed Gagaoua, Marwa Al Jammas, Muriel BonnetAbstractThis study analyzed the effect of gender on the abundances of 20 protein biomarkers of tenderness and/or intramuscular fat content in five muscles: Longissimus thoracis, previously identified as biomarkers of tenderness and/or intramuscular Semimembranosus, Rectus abdominis, Triceps brachii and Semitendinosus, from cows and steers of the Protected...
ScienceDirect Publication: Journal of Proteomics
Thu Mar 21, 2019 16:02
Comparative analysis of proteomic and metabolomic profiles of different species of <em>Paris</em>
Publication date: Available online 16 March 2019Source: Journal of ProteomicsAuthor(s): Feng Liu, Yanyan Meng, Kun He, Fajun Song, Jianhua Cheng, Hongxia Wang, Zhen Huang, Zhong Luo, Xianzhong YanAbstractAn extract prepared from species of Paris is the most widely consumed herbal product in China. The genus Paris includes a variety of genotypes with different medicinal component contents but only two are defined as official sources. Closely related species have different medicinal properties because...
ScienceDirect Publication: Journal of Proteomics
Sun Mar 17, 2019 13:43
Label-free absolute protein quantification with data-independent acquisition
Publication date: Available online 14 March 2019Source: Journal of ProteomicsAuthor(s): Bing He, Jian Shi, Xinwen Wang, Hui Jiang, Hao-Jie ZhuAbstractDespite data-independent acquisition (DIA) has been increasingly used for relative protein quantification, DIA-based label-free absolute quantification method has not been fully established. Here we present a novel DIA method using the TPA algorithm (DIA-TPA) for the absolute quantification of protein expressions in human liver microsomal and S9 samples....
ScienceDirect Publication: Journal of Proteomics
Fri Mar 15, 2019 12:45
In-depth profiles of bioactive large molecules in saliva secretions of leeches determined by combining salivary gland proteome and transcriptome data
Publication date: Available online 14 March 2019Source: Journal of ProteomicsAuthor(s): Zichao Liu, Xiangtong Tong, Yuan Su, Debin Wang, Xinru Du, Fang Zhao, Dingkang Wang, Feng ZhaoAbstractMedicinal leeches have been widely utilized in medical procedures for thousands of years. The application of leeches depends on the components of leech saliva secretions and active molecules, but many components of the secretions are not well characterized due to their low concentration and abundance. Determination...
ScienceDirect Publication: Journal of Proteomics
Fri Mar 15, 2019 12:45
What if? Mouse proteomics after gene inactivation
Publication date: 15 May 2019Source: Journal of Proteomics, Volume 199Author(s): Elisabetta Gianazza, Ingrid Miller, Uliano Guerrini, Luca Palazzolo, Tommaso Laurenzi, Chiara Parravicini, Ivano EberiniAbstractThe complex interactions among proteins and of proteins with small molecular weight protein ligands are overturned every time one of the components of the network is missing. For study purposes, animal models lacking one protein are obtained by experimental manipulation of the genome: in the...
ScienceDirect Publication: Journal of Proteomics
Tue Mar 19, 2019 14:59
A comparative study of the proteome regulated by the Rpb4 and Rpb7 subunits of RNA polymerase II in fission yeast
Publication date: 15 May 2019Source: Journal of Proteomics, Volume 199Author(s): Deepak Kumar, Swati Varshney, Shantanu Sengupta, Nimisha SharmaAbstractRNA polymerase II is a conserved multi-subunit enzyme made up of twelve different subunits. Two of these subunits, Rpb4 and Rpb7, have been shown to perform functions in both transcription as well as outside of transcription in Saccharomyces cerevisiae. However, our knowledge about the roles of these subunits in Schizosaccharomyces pombe and higher...
ScienceDirect Publication: Journal of Proteomics
Fri Mar 15, 2019 12:45
An inter-subunit protein-peptide interface that stabilizes the specific activity and oligomerization of the AAA+ chaperone Reptin
Publication date: 15 May 2019Source: Journal of Proteomics, Volume 199Author(s): Dominika Coufalova, Lucy Remnant, Lenka Hernychova, Petr Muller, Alan Healy, Srinivasaraghavan Kannan, Nicholas Westwood, Chandra S. Verma, Borek Vojtesek, Ted R. Hupp, Douglas R. HoustonAbstractReptin is a member of the AAA+ superfamily whose members can exist in equilibrium between monomeric apo forms and ligand bound hexamers. Inter-subunit protein-protein interfaces that stabilize Reptin in its oligomeric state are...
ScienceDirect Publication: Journal of Proteomics
Tue Mar 19, 2019 14:59
Differential responses to stress of two <em>Mycoplasma hyopneumoniae</em> strains
Publication date: 15 May 2019Source: Journal of Proteomics, Volume 199Author(s): Jéssica Andrade Paes, Fernanda M.A. Leal Zimmer, Hercules Moura, John R. Barr, Henrique Bunselmeyer FerreiraAbstractMycoplasma hyopneumoniae is a respiratory pathogen, causing porcine enzootic pneumonia. To survive in the porcine respiratory tract, M. hyopneumoniae must cope with both oxidative and heat stress imposed by the host. To get insights into M. hyopneumoniae stress responses and pathogenicity mechanisms, the...
ScienceDirect Publication: Journal of Proteomics
Fri Mar 15, 2019 12:45
Explaining meat quality of bulls and steers by differential proteome and phosphoproteome analysis of skeletal muscle
Publication date: 15 May 2019Source: Journal of Proteomics, Volume 199Author(s): Luiz H.P. Silva, Rafael T.S. Rodrigues, Débora E.F. Assis, Pedro D.B. Benedeti, Marcio S. Duarte, Mario L. ChizzottiAbstractThe objective of this study was to evaluate the differential proteome and phosphoproteome between bulls and steers during conversion of muscle to meat, as well as after 14 days of aging. Twelve male Nellore (Bos taurus indicus) calves were used, and six calves were randomly selected for surgical...
ScienceDirect Publication: Journal of Proteomics
Thu Mar 14, 2019 12:46
Analysis of durum wheat proteome changes under marine and fungal biostimulant treatments using large-scale quantitative proteomics: A useful dataset of durum wheat proteins
Publication date: Available online 9 March 2019Source: Journal of ProteomicsAuthor(s): Carole Pichereaux, Eve-Anne Laurent, Audrey Gargaros, Sébastien Viudes, Céline Durieu, Thierry Lamaze, Philippe Grieu, Odile Burlet-SchiltzAbstractDurum wheat requires high nitrogen inputs to obtain the high protein concentration necessary to satisfy pasta and semolina quality criteria. Optimizing plant nitrogen use efficiency is therefore of major importance for wheat grain quality. Here, we studied the impact...
ScienceDirect Publication: Journal of Proteomics
Sun Mar 10, 2019 14:28
Journal of Proteomics turns 10: Happy anniversary! and beyond
Publication date: 30 April 2019Source: Journal of Proteomics, Volume 198Author(s): Juan J. Calvete
ScienceDirect Publication: Journal of Proteomics
Sat Mar 09, 2019 15:16
Editorial Board
Publication date: 30 April 2019Source: Journal of Proteomics, Volume 198Author(s):
ScienceDirect Publication: Journal of Proteomics
Sat Mar 09, 2019 15:16
Corrigendum to "Proteomic characterization of outer membrane vesicles from gut mucosa-derived fusobacterium nucleatum". J Proteomics. 2019 Jan 8;195:125–137
Publication date: Available online 7 March 2019Source: Journal of ProteomicsAuthor(s): J. Liu, C.L. Hsieh, O. Gelincik, B. Devolder, S. Sei, S. Zhang, S.M. Lipkin, Y.F. Chang
ScienceDirect Publication: Journal of Proteomics
Thu Mar 07, 2019 15:40
Transcriptomic and proteomic analyses reveal new insight into chlorophyll synthesis and chloroplast structure of maize leaves under zinc deficiency stress
Publication date: 15 May 2019Source: Journal of Proteomics, Volume 199Author(s): Jinyao Zhang, Shengfeng Wang, Shuhui Song, Fangsen Xu, Yinghong Pan, Hong WangAbstractZinc (Zn) deficiency reduces chlorophyll content and damages chloroplast structure in leaves. However, little is known about the responses of chlorophyll synthesis and chloroplast structure of plants to Zn deficiency stress at the transcriptomic and proteomic level. In the present study, maize seedlings of cultivar ZD958 were grown...
ScienceDirect Publication: Journal of Proteomics
Tue Mar 19, 2019 14:59

Alexandros Sfakianakis
Anapafseos 5 . Agios Nikolaos
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